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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6006462 chr22:44344776 A/C SNAP29 chr22:21213271-21245506:+ -0.75 -7.02 7.7E-12 Box Plot
THCA rs6006462 chr22:44344776 A/C SNRPD3 chr22:24951471-25005947:+ -0.73 -9.36 3.02E-19 Box Plot
THCA rs6006462 chr22:44344776 A/C SREBF2 chr22:42229083-42303312:+ -0.57 -6.29 7.16E-10 Box Plot
THCA rs6006462 chr22:44344776 A/C SRRD chr22:26879843-26890624:+ -0.78 -8.2 2.28E-15 Box Plot
THCA rs6006462 chr22:44344776 A/C ST13 chr22:41220539-41253026:- -0.85 -10.57 1.27E-23 Box Plot
THCA rs6006462 chr22:44344776 A/C TAB1 chr22:39795746-39833065:+ -0.9 -9.78 1.05E-20 Box Plot
THCA rs6006462 chr22:44344776 A/C TBC1D10A chr22:30687979-30723035:- -0.5 -6.53 1.68E-10 Box Plot
THCA rs6006462 chr22:44344776 A/C TBC1D22A chr22:47158514-47571342:+ -0.55 -6.89 1.74E-11 Box Plot
THCA rs6006462 chr22:44344776 A/C TCF20 chr22:42556019-42739622:- -0.78 -9.39 2.39E-19 Box Plot
THCA rs6006462 chr22:44344776 A/C TCN2 chr22:31002825-31023265:+ -0.53 -5.98 4.45E-9 Box Plot
THCA rs6006462 chr22:44344776 A/C TEF chr22:41763337-41795330:+ -0.73 -6.65 8.0E-11 Box Plot
THCA rs6006462 chr22:44344776 A/C TFIP11 chr22:26887191-26908471:- -0.82 -8.45 3.55E-16 Box Plot
THCA rs6006462 chr22:44344776 A/C THAP7 chr22:21353393-21356485:- -0.59 -9.34 3.72E-19 Box Plot
THCA rs6006462 chr22:44344776 A/C THOC5 chr22:29901868-29951205:- -0.6 -8.36 6.83E-16 Box Plot
THCA rs6006462 chr22:44344776 A/C TMEM184B chr22:38615298-38669040:- -0.55 -7.85 2.7E-14 Box Plot